Genetic variation of Nang Thom Cho Dao rice variety based on whole genome sequencing
نویسندگان
چکیده
High-performance sequences are generating increasingly comprehensive catalogs of crop genetic variation. To make optimal use this vast collection data for research purposes, a robust and reproducible analytical pipeline discipline is required that capable accurately detecting favoring variants. The entire genome sequencing from the rice variety Nang Thom Cho Dao was analyzed using appropriate bioinformatic pipeline. A total 21 million reads with 6,6 GB were analyzed. SNPs indels found to be variable when compared Nipponbare reference genome. result showed novel Indel BADH2 gene in study will contribute valuable information development markers breeding strategies varieties.
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ژورنال
عنوان ژورنال: Can Tho University Journal of Science
سال: 2022
ISSN: ['2615-9422']
DOI: https://doi.org/10.22144/ctu.jen.2022.041